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Deep Disease

What bowel endometriosis techniques are used, and what risks?

The short answer

Bowel endometriosis surgery may use superficial shaving, full-thickness discoid excision, or segmental bowel resection, depending on disease depth and extent. Potential complications can include bowel leak, fistula, temporary ostomy, nerve-related changes, and altered bowel habits during recovery.

For bowel endometriosis, we tailor surgical options to how deep the disease goes and how much of the bowel wall is involved. Depending on the nodule’s size and location, we may use superficial shaving, a full-thickness discoid excision, or a segmental bowel resection to remove disease while protecting bowel function.

Each approach has different risks, which we review with you during pre-op planning so you understand why we recommend a specific technique. Potential complications can include a bowel leak, fistula, temporary ostomy, nerve-related changes, and altered bowel habits during recovery. Our goal is to balance thorough disease removal with safety and long-term function. During a consultation with our team, we’ll walk you through what to expect before and after surgery.

Where to go from here

Understand it, compare it with what you're feeling, then talk it through with us.

Step 1 · Understand

Understand the condition

Step 3 · Speak with Us

Facing Bowel Endometriosis Surgery?

Our specialists customize surgical techniques based on your disease depth to protect your bowel function. We guide you through risks and options so you feel confident in your treatment plan.

Questions people ask next

All deep disease questions
  • Shaving vs disc vs bowel resection for endometriosis: what’s the difference?

    Shaving removes disease from the bowel surface, disc excision removes a full-thickness piece of bowel wall, and segmental resection removes a bowel segment and reconnects the ends. The choice depends on lesion depth, size and location, bowel narrowing, symptoms and your goals.

  • How is bowel endometriosis treated without a colostomy?

    In many cases, bowel endometriosis can be treated surgically without a colostomy by removing disease from the bowel surface or removing deeper disease and repairing or reconnecting the bowel. A temporary stoma may be recommended in select higher-risk situations.

  • Do I need a colorectal surgeon for bowel endometriosis surgery?

    Sometimes, especially if imaging or an exam suggests deeper bowel involvement that may require opening, repairing or removing part of the bowel. A general surgeon or gynecologic oncologist credentialed in bowel surgery may also provide the needed expertise.

  • What are the main risks of endometriosis excision, and how are they minimized?

    The main risks of endometriosis excision are bleeding, infection, scar tissue (adhesions), and injury to the bowel, bladder or ureters. We minimize these risks with careful surgical planning, meticulous technique to protect organs and nerves, and the right expertise and tools.

Reach Out

Have a question?

Lotus Endometriosis Institute provides California-based surgical evaluation and advanced excision care for patients with suspected endometriosis, adenomyosis, complex pelvic pain, and related conditions.


Many patients contact us from outside California to learn whether traveling for in-person evaluation and possible surgery may be appropriate.

Call Us

(424) 255-1340

(805) 920-0909

Fax: (805) 935-4338

Santa Monica, CA

2121 Santa Monica Blvd, Santa Monica, CA 90404

Operating Hours

8am - 5pm
Monday - Friday

Arroyo Grande, CA

154 Traffic Way, Arroyo Grande, CA 93420